ID XXX; SV ; linear; genomic RNA; ; ; 3669 BP. XX AC XXX; XX DT 13-OCT-2016 (Created). DE Pseudomonas phage vB_PaeL_PcyII-10_LeviOr1, complete genome. KW FINISHED; maturation protein; coat protein; lysis protein; replicase. XX OS Pseudomonas phage LeviOR1 OC Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA OC stage; Leviviridae; Levivirus. XX PR Project:PRJEB9838; XX FH Key Location/Qualifiers FH FT source 1..3669 FT /organism="Pseudomonas phage 1RNA" FT /mol_type="genomic RNA" FT /host="Pseudomonas aeruginosa" FT /db_xref="taxon:12023" FT gene 96..1487 FT /gene="mat" FT /locus_tag="LeviOR1_1" FT CDS 96..1487 FT /gene="mat" FT /locus_tag="LeviOR1_1" FT /transl_table=11 FT /product="putative maturation protein" FT /translation="MRSETQEWEIYPCWHGKPPKTSGPTVVDSKGNIDVSAIPCETES FT NAGVTKGNHVDALPYWSDRLLVTVEPRVRNISYGVAVTRMPVPPPENTCIPDGDPGGS FT KTIVRNKYSIDPFEWAAAPTFDLPEVSPAELEFLRGMADTRALASLNKAMVNLPMLFK FT ERRETLKMAAGKVGVLADAARSIQQRDFSRYRKVAKRDRRRVARDIANEHLEFIFGWL FT PLIAEVEGAMDYIAQERFEFIKGRGSHVITRDQKVHVSAPVLGLDGWYGYNREVARAE FT LNGIRHELIGMRTNLRMDITSAIAGDARQLGFEPISTLYDMVPLSFVSGWVTNFDAYV FT RTIAPLVGLSFRTGSRNLRKQVVLDVAGRVLEQNPPTYPAPWKAWVEERDRSVSLLTG FT NRTRDERSLVLELPKASLHWDVDVGFNEVTAAISLLIQRKLKPLQRAIGIKQFRYRGP FT KPKWLQEIRYRKP" FT gene 1497..1886 FT /gene="cp" FT /locus_tag="LeviOR1_2" FT CDS 1497..1886 FT /gene="cp" FT /locus_tag="LeviOR1_2" FT /transl_table=11 FT /product="putative coat protein" FT /translation="MSRTIVLSVGGTSRTLTLDSISSNGTATFTEKAGPLVGRLQLQS FT RIRPNAAGTVLRASLKLSESQVSSDTAITGDGLPKVQYVQVWSHDISVVVASSVEKRT FT SLADLTAALVATAEVRNMVINGADPAI" FT gene 1711..1929 FT /gene="lys" FT /locus_tag="LeviOR1_3" FT CDS 1711..1929 FT /gene="lys" FT /locus_tag="LeviOR1_3" FT /"tta start" FT /transl_table=11 FT /product="putative hydrophobic protein" FT /translation="MPATVSRRCSTCRSGLTTFPSSWPVALKSVPVWLTSPLHSLQRP FT KSATWSSMAPIRRSERPGTSTKSPFTVA" FT gene 1954..3588 FT /gene="rep" FT /locus_tag="LeviOR1_4" FT CDS 1954..3588 FT /gene="rep" FT /locus_tag="LeviOR1_4" FT /transl_table=11 FT /product="putative RNA replicase, beta subunit" FT /translation="MHTLTAQVTSALLQDLGLESLPKEFPDRDSEFPARYLAYNFVRK FT LEPFSRKTDVPVAVLRNSLTTFMEAEYRCRVVNHHGRMYSALREEDRSYFTEAFRLAK FT IWINQTMSGYWPRWENARYTGGASRNCSRDRSLPALKWSGYAERSNLSTTRPALAVVN FT DYIKPEFSPSDWRERDVDIVDDSRFDFVAKTAKAVRFMAMEPEYNMLAQKCVGDCIRA FT ALNAQGINLDDQRPNQELAYLGSIFRTRATLDQSSASDCIALFLLRLLPERVRDWVLA FT CRTPATSVAGSRLVLEKVATMGNGFIFELQSLIFAAFAHACTQLSGGRECDIAVYGDD FT IIVSTPVARPLMDTLEYYGLIPNMEKSYWDEDEPFRESCGKHWFAGRDVTPFYVKEPL FT GPLRTLFRAYNGLKEWTMRTGIPLNRTLATILAAIPKKDRVIVPPSFSIDCGLHTPVS FT GCTFPKRVIRHGDIRYSFKCLVDTSEDVTARLDDEVKLRYWLFEPPAELLPRHLYPAS FT PLAGYPREEKRYVRGLSGESRPEVWARREAGPGDAP" SQ Sequence 3669 BP; 799 A; 996 C; 1015 G; 859 T; 0 other; ggtgtactcc cgcctgaact aggcgggagg acgctccagt cgttgtaccg aaaggtatcg 60 acggctcggt atcgagcccc tggaggagta ctagcgtgag atcagaaaca caggaatggg 120 aaatctaccc gtgctggcac gggaagcctc cgaaaaccag tggcccaact gtcgttgaca 180 gtaagggtaa cattgatgtt tcggccatcc catgtgagac tgaatcaaac gctggtgtga 240 cgaaagggaa ccatgtagat gcccttccgt actggtcgga tcgtctactc gtcacggttg 300 agccacgcgt acgtaacatc tcgtacggtg tggctgttac tcgtatgcct gtcccgccgc 360 ccgagaatac ctgtattccg gatggcgatc caggcggatc gaagacaatc gtgcgcaaca 420 agtactccat cgacccgttc gagtgggctg cggctccgac gttcgacctg cccgaggttt 480 ctccagctga gctggaattc ctccgcggta tggccgatac gcgtgctcta gcctccttga 540 ataaagcgat ggtcaacctt ccgatgctat tcaaagaacg tcgtgagacg ctcaagatgg 600 ccgcaggaaa ggttggtgta cttgcggatg cagctcgtag catccaacaa cgggacttct 660 ctcgctaccg caaggtagcg aagagggacc gtcgccgtgt cgcccgcgac atagcaaatg 720 agcatctaga gttcatcttc ggatggctcc cgctcattgc tgaagtcgaa ggtgcgatgg 780 attacattgc gcaagagcgc tttgaattca tcaaagggag agggtcgcat gtaatcacac 840 gcgatcagaa ggttcatgtt tccgcgccgg tcctaggact ggacggctgg tatggataca 900 atcgtgaagt ggcgcgtgcc gaactcaatg gcatacgaca cgaactgatt ggtatgcgta 960 ccaaccttcg gatggatatc acttcggcaa tcgccggtga tgcccgtcag cttggtttcg 1020 aacctatctc tactctctac gacatggtgc cattgagctt cgtatcaggt tgggtgacta 1080 acttcgatgc gtacgttcgt acgatagctc cgctagtcgg gttgtcgttt cgtacgggct 1140 cgcggaatct gcgtaagcag gtcgtcctcg atgttgcagg acgcgtgctt gagcagaatc 1200 cgcctaccta ccctgcgccg tggaaagcgt gggttgagga gcgcgaccgt tcggtctctc 1260 tcctcacggg taaccgtact cgtgatgagc gctcgttagt tctggaactt ccgaaggcat 1320 cccttcattg ggatgttgac gtcggtttca atgaagtaac ggctgccatc tccctcctta 1380 tacagcgaaa gctgaaaccg ctgcagcgtg ccatcggcat caagcagttt cgctacagag 1440 gccccaagcc aaagtggcta caagagatac ggtatagaaa accgtaagga gatataatgt 1500 ctcgcaccat cgttctttcg gttggcggca ccagccgcac tctcaccctg gactcgattt 1560 cgagtaacgg aactgctacc tttaccgaga aggctggccc tctggtcggt cgtctgcagc 1620 tgcaatcgcg cattcgcccg aatgcagccg gtaccgtact ccgtgcatcg ctcaaactga 1680 gcgaatccca ggtgagttcc gacaccgcca ttaccggcga cggtctcccg aaggtgcagt 1740 acgtgcaggt ctggtctcac gacatttccg tcgtcgtggc cagtagcgtt gaaaagcgta 1800 ccagtctggc tgacctcacc gctgcactcg ttgcaacggc cgaagtccgc aacatggtca 1860 tcaatggcgc cgatccggcg atctgagaga ccaggtactt caacgaaatc gccattcact 1920 gtggcgtaac cctgctactt ggagttattg cttatgcata ctcttactgc tcaagtaaca 1980 tcggctttat tgcaagactt gggtttggaa tcgctcccta aggagtttcc tgatcgggat 2040 tccgagttcc cggctcgata ccttgcgtac aatttcgtac gtaagctcga gccgttctct 2100 cgtaagaccg atgtcccggt tgcagtcctg cgtaattctc tgacaacctt tatggaagca 2160 gagtacaggt gccgtgttgt gaaccatcat ggtcgtatgt attccgcttt gcgtgaggaa 2220 gaccgatctt atttcacaga ggcattccgc ctcgctaaga tctggatcaa ccaaacaatg 2280 agcgggtact ggccgcgatg ggagaacgca cgctatactg gcggcgccag tcggaactgt 2340 tcgcgcgata gatcgcttcc agctttaaag tggagcggct atgccgaacg ttctaacttg 2400 agcacaacaa gaccagccct tgctgtcgtt aacgactaca tcaagcccga gttcagtcca 2460 agtgactggc gagagcgtga cgtagatatc gtcgatgaca gccgattcga cttcgttgct 2520 aaaaccgcaa aagctgtacg gtttatggca atggaacccg aatacaatat gctcgcgcag 2580 aagtgcgttg gcgattgtat tagggcggca ctgaacgcgc aaggtatcaa ccttgacgat 2640 cagcggccga atcaggagct tgcgtatctc gggtcgatat tcagaacccg agcaactctt 2700 gatcagtcga gcgcatcaga ttgcatcgct ctcttccttc tgcgcctcct cccggagcgc 2760 gtgagggatt gggtgcttgc atgcaggaca ccagcaactt ccgttgctgg ctcgagactt 2820 gtgctcgaga aggtagctac gatgggcaat gggttcatct ttgaactcca aagccttatc 2880 ttcgcagcct ttgcccatgc atgtacgcag ctttctggtg gaagggaatg cgacatagcc 2940 gtgtacggcg atgatatcat cgtctccacg ccagttgctc gcccgcttat ggatacgctg 3000 gaatactacg gtctcatccc gaatatggag aaatcctatt gggatgagga cgagccgttc 3060 cgcgaatcct gtggtaagca ctggtttgct ggtcgcgacg tgacgccctt ctatgtcaag 3120 gaaccgcttg gtccacttcg cacactgttc agggcctaca atggcctgaa agagtggacg 3180 atgcgaaccg gtattcctct taatcggact ctcgctacaa tccttgcagc gattccgaag 3240 aaggaccgtg tcattgtccc accatcgttt tcaatcgatt gtgggctcca cactccagtg 3300 tcgggttgca cgtttccaaa acgtgtaatc cgtcacggcg acattaggta ctcattcaag 3360 tgcctggtcg atacgagtga ggatgtgacc gctaggttag atgatgaggt aaagcttcgc 3420 tattggctct tcgagccgcc agcggaacta ttgccccgtc atttgtaccc ggcgtctccc 3480 cttgcgggtt atccccgtga ggagaagcgg tacgttcgcg gtctgagcgg tgagagccgc 3540 ccagaggtct gggcacgccg tgaggcgggc cccggcgatg ccccgtagag ggtagccgga 3600 aacggtaggt taactaacca ttaacctggt cttcggaccc gttggctgct tgctcagcag 3660 ccatcgacc 3669 //